Awarded
 GACR P202/12/2011 Parallel Input/Output Algorithms for Very Large Sparse Matrices, 2012  2014.
Running

SGS14/106/OHK3/1T/18 Algorithms for Parallel and Distributed Computing Systems, 2014. The proposed project is based on previous research results in the field
of parallel and distributed computing systems. It is aimed at massively
parallel computing, GPU computing, cluster computing, and global grid
computing systems. More specifically, the project is going to focus 1)
on the reseach of the architecture of the nondedicated cluster
architecture with the focus on the algorithms for distributed task
scheduling in such clusters, 2) on the design of efficient algorithms
for crystal structure determination based on powder diffraction method
on massively parallel GPU clusters, 3) on the parallelization of
immunesysteminspired algorithms on GPU clusters, 4) on the design of
efficient algorithms for data acquisition and visualization of very
large sparse matrices mapped rowwise/columnwise on processors of
massively parallel multiprocessor systems, and 5) on the reseach of
heuristic algorithms for resource allocation in worldwide computing
grids.
Passed
 SGS12/097/OHK3/1T/18 Application of paralelization of scientific computations, 2012. This project consists of several research subprojects that investigate various interesting parallel programming aspects.
The first research project concerns with sparse matrix storage formats.
It is focused on aspects of quadtree abstract data type for sparse
matrix representation. Preliminary results indicate high potential of
quadtree format, but it is necessary to implement more functions and
measure the performance thoroughly. SGS11/096/OHK3/1T/18 Parallel visualization of large sparse matrices, 2011.  SGS XXXXX Design and implementation of support mechanisms for peertopeer clusters, 2010Present. The objectives of grant are:
 Evaluate suitability of the peertopeer version of the system for desktop applications
 Propose communication topology for the system, that would scale to
large numbers of nodes, connected via various network channels(LAN,
Internet,..)
 Propose scheduling mechanisms suitable for peertopeer
environment, respecting fact that there is not trust among participating
nodes and there is no central trusted entity
 Propose a distributed file system addressing the both local
clustering needs of the system and as well possible extension into a
large scale grid.
 GACR 102/06/0943 Distributed cluster of nondedicated Linux workstations, 2006  2008. The objectives of grant were:
 Design and implement first version of SSI nondedicated linux cluster
 Propose security mechanisms for the environment
 Propose market based scheduling mechanisms for the system

